BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B06LP1|AL428669
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1788 0.0
3x_Contig130 147 5e-35
>3x_Contig1530
Length = 6216
Score = 1788 bits (902), Expect = 0.0
Identities = 928/934 (99%), Gaps = 2/934 (0%)
Strand = Plus / Plus
Query: 1 gatcccagttatttgtaaagtgctttcgacgagtcgagttgtttgggaatgcagctctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 gatcccagttatttgtaaagtgctttcgacgagtcgagttgtttgggaatgcagctctaa 2363
Query: 61 gtgggtggtaaattccatctaaagctaaatattggcgagagaccgatagcgaacaagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 gtgggtggtaaattccatctaaagctaaatattggcgagagaccgatagcgaacaagtac 2423
Query: 121 agtgatggaaagatgaaaagaactttgaaaagagagtgaaaaagtacgtgaaattgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 agtgatggaaagatgaaaagaactttgaaaagagagtgaaaaagtacgtgaaattgttga 2483
Query: 181 aagggaagggcatttgatcagacatggcgtttgcttcggctttcgctgggccagcatcag 240
||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||
Sbjct: 2484 aagggaagggcatttgatcagacatggcgtttggttggggtttcgctgggccaccatcag 2543
Query: 241 ttttagcggttggataaatcctcgggaatgtggctctgcttcggtagagtgttatagccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544 ttttagcggttggataaatcctcgggaatgtggctctgcttcggtagagtgttatagccc 2603
Query: 301 gtgggaatacagccagctgggactgaggattgcgacttttgtcaaggatgctggcgtaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 gtgggaatacagccagctgggactgaggattgcgacttttgtcaaggatgctggcgtaat 2663
Query: 361 ggttaaatgccgcccgtcttgaaacacggaccaaggagtctaacgtctatgcgagtgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 ggttaaatgccgcccgtcttgaaacacggaccaaggagtctaacgtctatgcgagtgttt 2723
Query: 421 gggtgtaaaacccgtacgcgtaatgaaagtgaacgtaggtgagggcccgcaa-ggtgcat 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2724 gggtgtaaaacccgtacgcgtaatgaaagtgaacgtaggtgagggcccgcaagggtgcat 2783
Query: 480 catcgaccgatcctgatgtcttcggatggatttgagtaagagcatagctgttgggacccg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 catcgaccgatcctgatgtcttcggatggatttgagtaagagcatagctgttgggacccg 2843
Query: 540 aaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 aaagatggtgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgt 2903
Query: 600 agcggttctgacgtgcaaatcgatcgtcgaatttgggtataggggcgaaagactaatcga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 agcggttctgacgtgcaaatcgatcgtcgaatttgggtataggggcgaaagactaatcga 2963
Query: 660 accatctagtagctggttcctgccgaagtttccctcaggatagcagaagctcgtatcagt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 accatctagtagctggttcctgccgaagtttccctcaggatagcagaagctcgtatcagt 3023
Query: 720 tttatgaggtaaagcgaatgattagaggtaccggggttgaaatgaccttgacctattctc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 tttatgaggtaaagcgaatgattagaggtaccggggttgaaatgaccttgacctattctc 3083
Query: 780 aaactttaaatatgtaagaagtccttgttgcttaattgaacgtggacatttgaatgaaga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 aaactttaaatatgtaagaagtccttgttgcttaattgaacgtggacatttgaatgaaga 3143
Query: 840 gcttttagtgggccattttttggtaagcagaactggcgatgcgggatgaaccgaacgtgg 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 gcttttagtgggcca-tttttggtaagcagaactggcgatgcgggatgaaccgaacgtgg 3202
Query: 900 agttaaggtgccggaatacacgctcatcagacac 933
||||||||||||||||||||||||||||||||||
Sbjct: 3203 agttaaggtgccggaatacacgctcatcagacac 3236
>3x_Contig130
Length = 115
Score = 147 bits (74), Expect = 5e-35
Identities = 81/82 (98%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 553 tatgcctgaatagggtgaagccagaggaaactctggtggaggctcgtagcggttctgacg 612
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tatgcctgaatagggtgaagc-agaggaaactctggtggaggctcgtagcggttctgacg 66
Query: 613 tgcaaatcgatcgtcgaatttg 634
||||||||||||||||||||||
Sbjct: 67 tgcaaatcgatcgtcgaatttg 88
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4732
Number of Sequences: 1807
Number of extensions: 4732
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)